Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Pcdh19Q80TF3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Gm13418-201ENSMUST00000119097 944 ntBASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh19Q80TF3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Gm25990-201ENSMUST00000102440 86 ntBASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Mir5131-201ENSMUST00000175426 93 ntBASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh19Q80TF3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms