Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.72□□□□□ -0.05
Pif1Q80SX8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pif1Q80SX8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Gm11780-201ENSMUST00000136880 516 ntBASIC14.71□□□□□ -0.05
Pif1Q80SX8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.71□□□□□ -0.05
Pif1Q80SX8 Gm9172-201ENSMUST00000212092 954 ntBASIC14.71□□□□□ -0.05
Pif1Q80SX8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pif1Q80SX8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pif1Q80SX8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm27702-201ENSMUST00000184512 56 ntBASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm36967-201ENSMUST00000193814 266 ntBASIC14.7□□□□□ -0.06
Pif1Q80SX8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.7□□□□□ -0.06
Pif1Q80SX8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pif1Q80SX8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.69□□□□□ -0.06
Pif1Q80SX8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.69□□□□□ -0.06
Pif1Q80SX8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.69□□□□□ -0.06
Pif1Q80SX8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.69□□□□□ -0.06
Pif1Q80SX8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pif1Q80SX8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Gm13036-201ENSMUST00000117799 748 ntBASIC14.68□□□□□ -0.06
Pif1Q80SX8 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.68□□□□□ -0.06
Pif1Q80SX8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms