Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm3aQ6PCM1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm3aQ6PCM1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Gm11764-201ENSMUST00000120221 623 ntBASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm3aQ6PCM1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Gm6443-201ENSMUST00000203599 874 ntBASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kdm3aQ6PCM1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Gm15358-201ENSMUST00000119249 520 ntBASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Gm43514-201ENSMUST00000198852 424 ntBASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms