Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.29■□□□□ 0.04
Rai1Q61818 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.29■□□□□ 0.04
Rai1Q61818 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.29■□□□□ 0.04
Rai1Q61818 Thap2-203ENSMUST00000218989 527 ntBASIC15.29■□□□□ 0.04
Rai1Q61818 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rai1Q61818 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rai1Q61818 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.29■□□□□ 0.04
Rai1Q61818 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rai1Q61818 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.29■□□□□ 0.04
Rai1Q61818 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rai1Q61818 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rai1Q61818 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rai1Q61818 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rai1Q61818 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Mir6990-201ENSMUST00000183724 91 ntBASIC15.28■□□□□ 0.04
Rai1Q61818 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.28■□□□□ 0.04
Rai1Q61818 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.28■□□□□ 0.04
Rai1Q61818 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rai1Q61818 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rai1Q61818 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rai1Q61818 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.27■□□□□ 0.04
Rai1Q61818 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.27■□□□□ 0.04
Rai1Q61818 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.27■□□□□ 0.04
Rai1Q61818 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rai1Q61818 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.27■□□□□ 0.04
Rai1Q61818 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rai1Q61818 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rai1Q61818 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.27■□□□□ 0.03
Rai1Q61818 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rai1Q61818 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.27■□□□□ 0.03
Rai1Q61818 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.27■□□□□ 0.03
Rai1Q61818 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rai1Q61818 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.26■□□□□ 0.03
Rai1Q61818 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Gm12008-201ENSMUST00000117791 755 ntBASIC15.26■□□□□ 0.03
Rai1Q61818 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rai1Q61818 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.26■□□□□ 0.03
Rai1Q61818 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rai1Q61818 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rai1Q61818 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.26■□□□□ 0.03
Rai1Q61818 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rai1Q61818 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rai1Q61818 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rai1Q61818 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms