Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mre11Q61216 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Mre11Q61216 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mre11Q61216 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Mre11Q61216 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
Mre11Q61216 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.19■□□□□ 0.66
Mre11Q61216 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Mre11Q61216 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mre11Q61216 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mre11Q61216 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Gm13148-201ENSMUST00000118892 745 ntBASIC19.18■□□□□ 0.66
Mre11Q61216 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mre11Q61216 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Mre11Q61216 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.18■□□□□ 0.66
Mre11Q61216 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.18■□□□□ 0.66
Mre11Q61216 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.18■□□□□ 0.66
Mre11Q61216 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mre11Q61216 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Mre11Q61216 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Gm2559-201ENSMUST00000201323 363 ntBASIC19.17■□□□□ 0.66
Mre11Q61216 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
Mre11Q61216 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.17■□□□□ 0.66
Mre11Q61216 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Mre11Q61216 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.17■□□□□ 0.66
Mre11Q61216 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mre11Q61216 Dio3-201ENSMUST00000097228 1449 ntBASIC19.17■□□□□ 0.66
Mre11Q61216 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Mre11Q61216 Gm12382-201ENSMUST00000122005 922 ntBASIC19.16■□□□□ 0.66
Mre11Q61216 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.16■□□□□ 0.66
Mre11Q61216 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mre11Q61216 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mre11Q61216 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Mre11Q61216 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.15■□□□□ 0.66
Mre11Q61216 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mre11Q61216 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms