Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Gm9727-201ENSMUST00000161387 555 ntBASIC18.32■□□□□ 0.52
Scnn1aQ61180 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Gm5264-201ENSMUST00000190584 848 ntBASIC18.32■□□□□ 0.52
Scnn1aQ61180 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scnn1aQ61180 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.32■□□□□ 0.52
Scnn1aQ61180 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scnn1aQ61180 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Scnn1aQ61180 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Gm12260-201ENSMUST00000122447 411 ntBASIC18.3■□□□□ 0.52
Scnn1aQ61180 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scnn1aQ61180 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Scnn1aQ61180 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.3■□□□□ 0.52
Scnn1aQ61180 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.29■□□□□ 0.52
Scnn1aQ61180 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Scnn1aQ61180 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.28■□□□□ 0.52
Scnn1aQ61180 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.28■□□□□ 0.52
Scnn1aQ61180 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Scnn1aQ61180 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scnn1aQ61180 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scnn1aQ61180 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Scnn1aQ61180 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scnn1aQ61180 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.27■□□□□ 0.52
Scnn1aQ61180 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Scnn1aQ61180 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scnn1aQ61180 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms