Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps54Q5SPW0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps54Q5SPW0 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.14■□□□□ 0.66
Vps54Q5SPW0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps54Q5SPW0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Gm6376-201ENSMUST00000209407 580 ntBASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Rps4l-201ENSMUST00000071745 943 ntBASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.14■□□□□ 0.65
Vps54Q5SPW0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm13418-201ENSMUST00000119097 944 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm8825-201ENSMUST00000182565 998 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm4518-201ENSMUST00000182638 718 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vps54Q5SPW0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps54Q5SPW0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps54Q5SPW0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms