Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Gm10399-202ENSMUST00000202768 748 ntBASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Gm6311-201ENSMUST00000073790 878 ntBASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Efs-202ENSMUST00000227037 2540 ntBASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.82□□□□□ -0.68
Trav3-1Q5R1I8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Gm42911-201ENSMUST00000199360 1630 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Scarna2-201ENSMUST00000157560 414 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms