Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Gm8655-201ENSMUST00000221159 852 ntBASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm18195-201ENSMUST00000207604 706 ntBASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-4Q5R1I0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm8097-201ENSMUST00000117903 829 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm7862-201ENSMUST00000121461 292 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm4535-201ENSMUST00000182274 558 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Gm10355-201ENSMUST00000097146 517 ntBASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-4Q5R1I0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms