Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Mir8112-201ENSMUST00000184382 131 ntBASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Gm29791-202ENSMUST00000207888 369 ntBASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trav3-3Q5R1C3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Gm18284-201ENSMUST00000172604 624 ntBASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Gm44549-201ENSMUST00000208351 577 ntBASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Zfp783-201ENSMUST00000095946 670 ntBASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-3Q5R1C3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-3Q5R1C3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-3Q5R1C3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms