Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Haglr-201ENSMUST00000100000 2085 ntBASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rc3h1Q4VGL6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Gm5364-201ENSMUST00000216789 889 ntBASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 AV026068-213ENSMUST00000223675 1171 ntBASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.4■□□□□ 0.54
Rc3h1Q4VGL6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Rc3h1Q4VGL6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Gm13036-201ENSMUST00000117799 748 ntBASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Gm27628-201ENSMUST00000184911 107 ntBASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Grk6-207ENSMUST00000225925 2769 ntBASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rc3h1Q4VGL6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rc3h1Q4VGL6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h1Q4VGL6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms