Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ddx49Q4FZF3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx49Q4FZF3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx49Q4FZF3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Ddx49Q4FZF3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx49Q4FZF3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx49Q4FZF3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Gm45167-201ENSMUST00000208007 322 ntBASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx49Q4FZF3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx49Q4FZF3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Mir6404-201ENSMUST00000183699 94 ntBASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx49Q4FZF3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Gm17271-201ENSMUST00000165535 355 ntBASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Gm27300-201ENSMUST00000184085 97 ntBASIC18.47■□□□□ 0.55
Ddx49Q4FZF3 Gm27335-201ENSMUST00000184758 97 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms