Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syne3Q4FZC9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Syne3Q4FZC9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.96■□□□□ 0.31
Syne3Q4FZC9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Syne3Q4FZC9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syne3Q4FZC9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne3Q4FZC9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne3Q4FZC9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne3Q4FZC9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Syne3Q4FZC9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms