Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BC051142Q3V0M8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.09■□□□□ 0.33
BC051142Q3V0M8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BC051142Q3V0M8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BC051142Q3V0M8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.08■□□□□ 0.32
BC051142Q3V0M8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BC051142Q3V0M8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BC051142Q3V0M8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BC051142Q3V0M8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BC051142Q3V0M8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms