Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm37714-201ENSMUST00000194742 342 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm42612-201ENSMUST00000197986 623 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm43170-201ENSMUST00000199827 612 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gm22189-201ENSMUST00000103822 86 ntBASIC14.23□□□□□ -0.13
Chd8Q09XV5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd8Q09XV5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Gm22902-201ENSMUST00000158488 302 ntBASIC14.22□□□□□ -0.13
Chd8Q09XV5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Mir8112-201ENSMUST00000184382 131 ntBASIC14.22□□□□□ -0.13
Chd8Q09XV5 Gm9682-201ENSMUST00000197505 556 ntBASIC14.22□□□□□ -0.13
Chd8Q09XV5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd8Q09XV5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.21□□□□□ -0.13
Chd8Q09XV5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd8Q09XV5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Gm18049-201ENSMUST00000208909 581 ntBASIC14.21□□□□□ -0.14
Chd8Q09XV5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd8Q09XV5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.2□□□□□ -0.14
Chd8Q09XV5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Chd8Q09XV5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms