Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.15■□□□□ 0.02
Atf4Q06507 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.15■□□□□ 0.02
Atf4Q06507 Gm2213-201ENSMUST00000197485 688 ntBASIC15.15■□□□□ 0.02
Atf4Q06507 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.15■□□□□ 0.02
Atf4Q06507 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf4Q06507 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Atf4Q06507 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Atf4Q06507 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Gm11594-201ENSMUST00000122313 162 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.14■□□□□ 0.01
Atf4Q06507 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44357-201ENSMUST00000195897 142 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Gm19658-201ENSMUST00000196231 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44367-201ENSMUST00000196836 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44350-201ENSMUST00000197197 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44390-201ENSMUST00000197533 144 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44313-201ENSMUST00000198018 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44486-201ENSMUST00000198508 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44454-201ENSMUST00000198541 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44314-201ENSMUST00000199263 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44394-201ENSMUST00000199558 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44484-201ENSMUST00000199873 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44466-201ENSMUST00000200264 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm44359-201ENSMUST00000200671 138 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Gm10060-201ENSMUST00000212002 111 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.14■□□□□ 0.01
Atf4Q06507 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Atf4Q06507 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf4Q06507 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Gm22885-201ENSMUST00000157410 107 ntBASIC15.13■□□□□ 0.01
Atf4Q06507 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Atf4Q06507 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Atf4Q06507 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.13■□□□□ 0.01
Atf4Q06507 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.13■□□□□ 0.01
Atf4Q06507 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atf4Q06507 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.12■□□□□ 0.01
Atf4Q06507 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf4Q06507 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf4Q06507 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Atf4Q06507 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.12■□□□□ 0.01
Atf4Q06507 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf4Q06507 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf4Q06507 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf4Q06507 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf4Q06507 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf4Q06507 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Atf4Q06507 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf4Q06507 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms