Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SgcaP82350 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SgcaP82350 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SgcaP82350 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SgcaP82350 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.42□□□□□ -0.26
SgcaP82350 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SgcaP82350 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.42□□□□□ -0.26
SgcaP82350 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.42□□□□□ -0.26
SgcaP82350 Gm37179-201ENSMUST00000194862 823 ntBASIC13.42□□□□□ -0.26
SgcaP82350 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.42□□□□□ -0.26
SgcaP82350 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SgcaP82350 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SgcaP82350 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SgcaP82350 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.41□□□□□ -0.26
SgcaP82350 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.41□□□□□ -0.26
SgcaP82350 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.41□□□□□ -0.26
SgcaP82350 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SgcaP82350 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SgcaP82350 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Gm18958-201ENSMUST00000174258 762 ntBASIC13.4□□□□□ -0.26
SgcaP82350 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.4□□□□□ -0.26
SgcaP82350 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SgcaP82350 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
SgcaP82350 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
SgcaP82350 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
SgcaP82350 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms