Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ThraP63058 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ThraP63058 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Gm34391-201ENSMUST00000203706 907 ntBASIC16.17■□□□□ 0.18
ThraP63058 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.17■□□□□ 0.18
ThraP63058 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.17■□□□□ 0.18
ThraP63058 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ThraP63058 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ThraP63058 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ThraP63058 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.16■□□□□ 0.18
ThraP63058 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.16■□□□□ 0.18
ThraP63058 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ThraP63058 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ThraP63058 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.16■□□□□ 0.18
ThraP63058 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
ThraP63058 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.15■□□□□ 0.18
ThraP63058 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Phf7-203ENSMUST00000226565 1971 ntBASIC16.15■□□□□ 0.18
ThraP63058 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.15■□□□□ 0.18
ThraP63058 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.15■□□□□ 0.18
ThraP63058 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.15■□□□□ 0.18
ThraP63058 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.15■□□□□ 0.18
ThraP63058 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ThraP63058 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ThraP63058 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ThraP63058 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ThraP63058 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
ThraP63058 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ThraP63058 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
ThraP63058 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.14■□□□□ 0.17
ThraP63058 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.14■□□□□ 0.17
ThraP63058 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.14■□□□□ 0.17
ThraP63058 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.14■□□□□ 0.17
ThraP63058 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.14■□□□□ 0.17
ThraP63058 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
ThraP63058 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
ThraP63058 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
ThraP63058 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.14■□□□□ 0.17
ThraP63058 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ThraP63058 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.14■□□□□ 0.17
ThraP63058 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms