Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lmo4P61969 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lmo4P61969 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.88□□□□□ -0.35
Lmo4P61969 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lmo4P61969 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.88□□□□□ -0.35
Lmo4P61969 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.88□□□□□ -0.35
Lmo4P61969 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.88□□□□□ -0.35
Lmo4P61969 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lmo4P61969 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Gm19164-201ENSMUST00000210667 640 ntBASIC12.88□□□□□ -0.35
Lmo4P61969 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.88□□□□□ -0.35
Lmo4P61969 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lmo4P61969 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Lmo4P61969 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lmo4P61969 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.88□□□□□ -0.35
Lmo4P61969 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lmo4P61969 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.87□□□□□ -0.35
Lmo4P61969 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Gm45167-201ENSMUST00000208007 322 ntBASIC12.87□□□□□ -0.35
Lmo4P61969 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Lmo4P61969 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.87□□□□□ -0.35
Lmo4P61969 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lmo4P61969 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lmo4P61969 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lmo4P61969 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lmo4P61969 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lmo4P61969 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.86□□□□□ -0.35
Lmo4P61969 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.86□□□□□ -0.35
Lmo4P61969 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.86□□□□□ -0.35
Lmo4P61969 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.86□□□□□ -0.35
Lmo4P61969 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lmo4P61969 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lmo4P61969 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lmo4P61969 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.85□□□□□ -0.35
Lmo4P61969 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.85□□□□□ -0.35
Lmo4P61969 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Lmo4P61969 Gm4995-201ENSMUST00000117247 432 ntBASIC12.85□□□□□ -0.35
Lmo4P61969 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Lmo4P61969 Gm4899-201ENSMUST00000178708 719 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms