Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tubgcp3P58854 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.34■□□□□ 0.21
Tubgcp3P58854 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tubgcp3P58854 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Tubgcp3P58854 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tubgcp3P58854 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tubgcp3P58854 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Gm6659-201ENSMUST00000174752 547 ntBASIC16.33■□□□□ 0.2
Tubgcp3P58854 Gm23634-201ENSMUST00000175071 91 ntBASIC16.33■□□□□ 0.2
Tubgcp3P58854 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tubgcp3P58854 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Gm25016-201ENSMUST00000158399 131 ntBASIC16.32■□□□□ 0.2
Tubgcp3P58854 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubgcp3P58854 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Gm11950-201ENSMUST00000121615 838 ntBASIC16.31■□□□□ 0.2
Tubgcp3P58854 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.31■□□□□ 0.2
Tubgcp3P58854 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tubgcp3P58854 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubgcp3P58854 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.3■□□□□ 0.2
Tubgcp3P58854 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.3■□□□□ 0.2
Tubgcp3P58854 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.3■□□□□ 0.2
Tubgcp3P58854 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubgcp3P58854 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubgcp3P58854 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms