Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm11539-201ENSMUST00000119837 557 ntBASIC12.94□□□□□ -0.34
Sssca1P56873 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.94□□□□□ -0.34
Sssca1P56873 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.94□□□□□ -0.34
Sssca1P56873 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.94□□□□□ -0.34
Sssca1P56873 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.93□□□□□ -0.34
Sssca1P56873 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm13168-201ENSMUST00000121771 632 ntBASIC12.93□□□□□ -0.34
Sssca1P56873 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.93□□□□□ -0.34
Sssca1P56873 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.93□□□□□ -0.34
Sssca1P56873 Gm44450-201ENSMUST00000199528 114 ntBASIC12.93□□□□□ -0.34
Sssca1P56873 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.93□□□□□ -0.34
Sssca1P56873 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Sssca1P56873 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.93□□□□□ -0.34
Sssca1P56873 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.93□□□□□ -0.34
Sssca1P56873 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sssca1P56873 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.92□□□□□ -0.34
Sssca1P56873 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.92□□□□□ -0.34
Sssca1P56873 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sssca1P56873 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.92□□□□□ -0.34
Sssca1P56873 Gm715-201ENSMUST00000117865 831 ntBASIC12.92□□□□□ -0.34
Sssca1P56873 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.92□□□□□ -0.34
Sssca1P56873 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Gm36967-201ENSMUST00000193814 266 ntBASIC12.92□□□□□ -0.34
Sssca1P56873 Gm18421-201ENSMUST00000204122 625 ntBASIC12.92□□□□□ -0.34
Sssca1P56873 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sssca1P56873 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Sssca1P56873 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sssca1P56873 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Sssca1P56873 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sssca1P56873 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms