Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Gm7222-201ENSMUST00000117512 906 ntBASIC16.98■□□□□ 0.31
NrlP54846 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.98■□□□□ 0.31
NrlP54846 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NrlP54846 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.98■□□□□ 0.31
NrlP54846 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Gm9727-201ENSMUST00000161387 555 ntBASIC16.98■□□□□ 0.31
NrlP54846 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Gm43575-201ENSMUST00000196420 516 ntBASIC16.98■□□□□ 0.31
NrlP54846 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NrlP54846 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NrlP54846 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NrlP54846 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.97■□□□□ 0.31
NrlP54846 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.97■□□□□ 0.31
NrlP54846 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.97■□□□□ 0.31
NrlP54846 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.97■□□□□ 0.31
NrlP54846 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.97■□□□□ 0.31
NrlP54846 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.97■□□□□ 0.31
NrlP54846 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NrlP54846 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
NrlP54846 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.96■□□□□ 0.31
NrlP54846 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NrlP54846 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NrlP54846 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NrlP54846 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NrlP54846 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.95■□□□□ 0.3
NrlP54846 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.95■□□□□ 0.3
NrlP54846 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.95■□□□□ 0.3
NrlP54846 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.95■□□□□ 0.3
NrlP54846 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.95■□□□□ 0.3
NrlP54846 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
NrlP54846 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NrlP54846 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NrlP54846 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NrlP54846 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NrlP54846 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NrlP54846 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms