Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm28033-201ENSMUST00000184224 96 ntBASIC15.8■□□□□ 0.12
Pdx1P52946 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdx1P52946 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.8■□□□□ 0.12
Pdx1P52946 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.8■□□□□ 0.12
Pdx1P52946 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.8■□□□□ 0.12
Pdx1P52946 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Pdx1P52946 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.8■□□□□ 0.12
Pdx1P52946 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Pdx1P52946 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdx1P52946 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdx1P52946 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.79■□□□□ 0.12
Pdx1P52946 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdx1P52946 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.79■□□□□ 0.12
Pdx1P52946 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdx1P52946 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.79■□□□□ 0.12
Pdx1P52946 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.79■□□□□ 0.12
Pdx1P52946 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.79■□□□□ 0.12
Pdx1P52946 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.79■□□□□ 0.12
Pdx1P52946 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdx1P52946 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.79■□□□□ 0.12
Pdx1P52946 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdx1P52946 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pdx1P52946 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Gm12895-201ENSMUST00000122214 226 ntBASIC15.78■□□□□ 0.12
Pdx1P52946 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Gm27867-201ENSMUST00000184778 125 ntBASIC15.78■□□□□ 0.12
Pdx1P52946 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.78■□□□□ 0.12
Pdx1P52946 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.78■□□□□ 0.12
Pdx1P52946 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.78■□□□□ 0.12
Pdx1P52946 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pdx1P52946 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdx1P52946 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.77■□□□□ 0.12
Pdx1P52946 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.77■□□□□ 0.12
Pdx1P52946 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pdx1P52946 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdx1P52946 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.77■□□□□ 0.12
Pdx1P52946 Gm9103-201ENSMUST00000119371 405 ntBASIC15.77■□□□□ 0.12
Pdx1P52946 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.77■□□□□ 0.12
Pdx1P52946 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms