Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ercc3P49135 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Gm44454-201ENSMUST00000198541 138 ntBASIC18.94■□□□□ 0.62
Ercc3P49135 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.94■□□□□ 0.62
Ercc3P49135 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ercc3P49135 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ercc3P49135 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ercc3P49135 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ercc3P49135 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.93■□□□□ 0.62
Ercc3P49135 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ercc3P49135 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.93■□□□□ 0.62
Ercc3P49135 Gm15165-201ENSMUST00000118140 502 ntBASIC18.93■□□□□ 0.62
Ercc3P49135 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.93■□□□□ 0.62
Ercc3P49135 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.93■□□□□ 0.62
Ercc3P49135 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.93■□□□□ 0.62
Ercc3P49135 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.93■□□□□ 0.62
Ercc3P49135 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ercc3P49135 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ercc3P49135 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.93■□□□□ 0.62
Ercc3P49135 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ercc3P49135 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Rprl3-201ENSMUST00000157400 290 ntBASIC18.92■□□□□ 0.62
Ercc3P49135 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ercc3P49135 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.92■□□□□ 0.62
Ercc3P49135 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ercc3P49135 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Ercc3P49135 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ercc3P49135 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.91■□□□□ 0.62
Ercc3P49135 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ercc3P49135 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ercc3P49135 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Ercc3P49135 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.91■□□□□ 0.62
Ercc3P49135 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.91■□□□□ 0.62
Ercc3P49135 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.91■□□□□ 0.62
Ercc3P49135 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ercc3P49135 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.91■□□□□ 0.62
Ercc3P49135 Gm7506-201ENSMUST00000207758 815 ntBASIC18.91■□□□□ 0.62
Ercc3P49135 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Ercc3P49135 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ercc3P49135 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ercc3P49135 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ercc3P49135 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ercc3P49135 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ercc3P49135 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ercc3P49135 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ercc3P49135 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ercc3P49135 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.9■□□□□ 0.62
Ercc3P49135 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ercc3P49135 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ercc3P49135 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ercc3P49135 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 Gm12644-201ENSMUST00000119935 606 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 Gm25745-201ENSMUST00000174945 133 ntBASIC18.9■□□□□ 0.62
Ercc3P49135 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms