Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Xcl1P47993 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Xcl1P47993 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC10.45□□□□□ -0.74
Xcl1P47993 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Xcl1P47993 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Xcl1P47993 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Xcl1P47993 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.45□□□□□ -0.74
Xcl1P47993 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.45□□□□□ -0.74
Xcl1P47993 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Xcl1P47993 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Xcl1P47993 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Xcl1P47993 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.44□□□□□ -0.74
Xcl1P47993 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Xcl1P47993 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.44□□□□□ -0.74
Xcl1P47993 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.44□□□□□ -0.74
Xcl1P47993 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Xcl1P47993 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Xcl1P47993 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.44□□□□□ -0.74
Xcl1P47993 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Xcl1P47993 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.43□□□□□ -0.74
Xcl1P47993 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Xcl1P47993 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Xcl1P47993 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Xcl1P47993 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Xcl1P47993 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC10.43□□□□□ -0.74
Xcl1P47993 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms