Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Vps4bP46467 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Vps4bP46467 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Gm22697-201ENSMUST00000175194 63 ntBASIC16.22■□□□□ 0.19
Vps4bP46467 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Vps4bP46467 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps4bP46467 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Vps4bP46467 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps4bP46467 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vps4bP46467 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.22■□□□□ 0.19
Vps4bP46467 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.21■□□□□ 0.19
Vps4bP46467 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Vps4bP46467 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Vps4bP46467 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vps4bP46467 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Vps4bP46467 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.21■□□□□ 0.19
Vps4bP46467 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.21■□□□□ 0.19
Vps4bP46467 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.21■□□□□ 0.19
Vps4bP46467 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Vps4bP46467 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.21■□□□□ 0.19
Vps4bP46467 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vps4bP46467 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vps4bP46467 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps4bP46467 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vps4bP46467 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vps4bP46467 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Gm23634-201ENSMUST00000175071 91 ntBASIC16.2■□□□□ 0.18
Vps4bP46467 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vps4bP46467 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.2■□□□□ 0.18
Vps4bP46467 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vps4bP46467 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vps4bP46467 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vps4bP46467 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.19■□□□□ 0.18
Vps4bP46467 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.19■□□□□ 0.18
Vps4bP46467 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.19■□□□□ 0.18
Vps4bP46467 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Vps4bP46467 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Gm10052-201ENSMUST00000168019 960 ntBASIC16.19■□□□□ 0.18
Vps4bP46467 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Gm7729-201ENSMUST00000050143 801 ntBASIC16.19■□□□□ 0.18
Vps4bP46467 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps4bP46467 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vps4bP46467 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4bP46467 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4bP46467 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vps4bP46467 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms