Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx1-2P42580 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm22697-201ENSMUST00000175194 63 ntBASIC19.67■□□□□ 0.74
Nkx1-2P42580 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm27389-201ENSMUST00000183622 195 ntBASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.67■□□□□ 0.74
Nkx1-2P42580 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.67■□□□□ 0.74
Nkx1-2P42580 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx1-2P42580 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Gm18032-201ENSMUST00000222541 538 ntBASIC19.66■□□□□ 0.74
Nkx1-2P42580 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nkx1-2P42580 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.65■□□□□ 0.74
Nkx1-2P42580 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.65■□□□□ 0.74
Nkx1-2P42580 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx1-2P42580 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-2P42580 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-2P42580 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-2P42580 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-2P42580 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx1-2P42580 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx1-2P42580 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.63■□□□□ 0.73
Nkx1-2P42580 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx1-2P42580 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms