Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Foxa1P35582 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.77□□□□□ -0.05
Foxa1P35582 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Foxa1P35582 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Foxa1P35582 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Foxa1P35582 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.77□□□□□ -0.05
Foxa1P35582 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.77□□□□□ -0.05
Foxa1P35582 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.77□□□□□ -0.05
Foxa1P35582 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Foxa1P35582 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Foxa1P35582 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Foxa1P35582 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Foxa1P35582 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.76□□□□□ -0.05
Foxa1P35582 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.76□□□□□ -0.05
Foxa1P35582 Gm9103-201ENSMUST00000119371 405 ntBASIC14.76□□□□□ -0.05
Foxa1P35582 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.76□□□□□ -0.05
Foxa1P35582 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Foxa1P35582 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Foxa1P35582 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.76□□□□□ -0.05
Foxa1P35582 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Foxa1P35582 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Foxa1P35582 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.76□□□□□ -0.05
Foxa1P35582 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Foxa1P35582 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Gm15165-201ENSMUST00000118140 502 ntBASIC14.75□□□□□ -0.05
Foxa1P35582 Gm12895-201ENSMUST00000122214 226 ntBASIC14.75□□□□□ -0.05
Foxa1P35582 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Gm28033-201ENSMUST00000184224 96 ntBASIC14.75□□□□□ -0.05
Foxa1P35582 Gm27867-201ENSMUST00000184778 125 ntBASIC14.75□□□□□ -0.05
Foxa1P35582 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.75□□□□□ -0.05
Foxa1P35582 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.75□□□□□ -0.05
Foxa1P35582 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.75□□□□□ -0.05
Foxa1P35582 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.75□□□□□ -0.05
Foxa1P35582 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Foxa1P35582 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.75□□□□□ -0.05
Foxa1P35582 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Foxa1P35582 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Foxa1P35582 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Foxa1P35582 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Foxa1P35582 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.74□□□□□ -0.05
Foxa1P35582 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Foxa1P35582 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.74□□□□□ -0.05
Foxa1P35582 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Foxa1P35582 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.74□□□□□ -0.05
Foxa1P35582 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.74□□□□□ -0.05
Foxa1P35582 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.74□□□□□ -0.05
Foxa1P35582 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.74□□□□□ -0.05
Foxa1P35582 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms