Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.13□□□□□ -0.15
Cd28P31041 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.13□□□□□ -0.15
Cd28P31041 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cd28P31041 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Cd28P31041 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd28P31041 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.12□□□□□ -0.15
Cd28P31041 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cd28P31041 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.12□□□□□ -0.15
Cd28P31041 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cd28P31041 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cd28P31041 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cd28P31041 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cd28P31041 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd28P31041 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.11□□□□□ -0.15
Cd28P31041 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Gm15378-201ENSMUST00000121894 207 ntBASIC14.11□□□□□ -0.15
Cd28P31041 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cd28P31041 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cd28P31041 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.11□□□□□ -0.15
Cd28P31041 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd28P31041 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cd28P31041 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cd28P31041 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.1□□□□□ -0.15
Cd28P31041 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cd28P31041 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.1□□□□□ -0.15
Cd28P31041 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.1□□□□□ -0.15
Cd28P31041 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms