Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp3P28862 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp3P28862 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Gm11764-201ENSMUST00000120221 623 ntBASIC17.06■□□□□ 0.32
Mmp3P28862 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.06■□□□□ 0.32
Mmp3P28862 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp3P28862 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.06■□□□□ 0.32
Mmp3P28862 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.06■□□□□ 0.32
Mmp3P28862 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mmp3P28862 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp3P28862 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp3P28862 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mmp3P28862 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Gm9727-201ENSMUST00000161387 555 ntBASIC17.05■□□□□ 0.32
Mmp3P28862 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Mmp3P28862 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp3P28862 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp3P28862 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp3P28862 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.05■□□□□ 0.32
Mmp3P28862 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp3P28862 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp3P28862 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.04■□□□□ 0.32
Mmp3P28862 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mmp3P28862 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mmp3P28862 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Mmp3P28862 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp3P28862 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp3P28862 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp3P28862 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp3P28862 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.03■□□□□ 0.32
Mmp3P28862 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Mmp3P28862 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.03■□□□□ 0.32
Mmp3P28862 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mmp3P28862 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Mmp3P28862 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp3P28862 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp3P28862 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mmp3P28862 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.03■□□□□ 0.32
Mmp3P28862 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp3P28862 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp3P28862 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp3P28862 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms