Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pde6bP23440 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.41■□□□□ 0.38
Pde6bP23440 Gm12497-201ENSMUST00000138778 237 ntBASIC17.41■□□□□ 0.38
Pde6bP23440 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.41■□□□□ 0.38
Pde6bP23440 Gm8000-201ENSMUST00000188378 592 ntBASIC17.41■□□□□ 0.38
Pde6bP23440 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pde6bP23440 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pde6bP23440 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pde6bP23440 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Pde6bP23440 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6bP23440 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6bP23440 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6bP23440 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6bP23440 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.39■□□□□ 0.37
Pde6bP23440 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pde6bP23440 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pde6bP23440 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Gm15173-201ENSMUST00000122049 433 ntBASIC17.39■□□□□ 0.37
Pde6bP23440 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.39■□□□□ 0.37
Pde6bP23440 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.39■□□□□ 0.37
Pde6bP23440 Gm36967-201ENSMUST00000193814 266 ntBASIC17.39■□□□□ 0.37
Pde6bP23440 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pde6bP23440 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.39■□□□□ 0.37
Pde6bP23440 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6bP23440 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Gm4459-201ENSMUST00000118750 468 ntBASIC17.38■□□□□ 0.37
Pde6bP23440 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.38■□□□□ 0.37
Pde6bP23440 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.38■□□□□ 0.37
Pde6bP23440 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.38■□□□□ 0.37
Pde6bP23440 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6bP23440 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.37■□□□□ 0.37
Pde6bP23440 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.37■□□□□ 0.37
Pde6bP23440 Gm9172-201ENSMUST00000212092 954 ntBASIC17.37■□□□□ 0.37
Pde6bP23440 Gm8655-201ENSMUST00000221159 852 ntBASIC17.37■□□□□ 0.37
Pde6bP23440 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms