Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Gm18489-201ENSMUST00000172565 551 ntBASIC17.67■□□□□ 0.42
Hoxc6P10629 Gm17968-201ENSMUST00000194902 784 ntBASIC17.67■□□□□ 0.42
Hoxc6P10629 Gm44492-201ENSMUST00000197012 141 ntBASIC17.67■□□□□ 0.42
Hoxc6P10629 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.67■□□□□ 0.42
Hoxc6P10629 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.66■□□□□ 0.42
Hoxc6P10629 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.66■□□□□ 0.42
Hoxc6P10629 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Gm7787-201ENSMUST00000216858 688 ntBASIC17.66■□□□□ 0.42
Hoxc6P10629 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc6P10629 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.66■□□□□ 0.42
Hoxc6P10629 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc6P10629 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hoxc6P10629 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc6P10629 Gm13216-201ENSMUST00000117145 591 ntBASIC17.65■□□□□ 0.42
Hoxc6P10629 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.65■□□□□ 0.42
Hoxc6P10629 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxc6P10629 Gm9682-201ENSMUST00000197505 556 ntBASIC17.65■□□□□ 0.42
Hoxc6P10629 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.65■□□□□ 0.42
Hoxc6P10629 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.65■□□□□ 0.42
Hoxc6P10629 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc6P10629 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc6P10629 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc6P10629 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc6P10629 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxc6P10629 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Gm13597-201ENSMUST00000121239 375 ntBASIC17.64■□□□□ 0.41
Hoxc6P10629 Mir1895-201ENSMUST00000122615 79 ntBASIC17.64■□□□□ 0.41
Hoxc6P10629 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.64■□□□□ 0.41
Hoxc6P10629 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc6P10629 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc6P10629 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc6P10629 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc6P10629 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Hoxc6P10629 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Gm14057-201ENSMUST00000120631 482 ntBASIC17.63■□□□□ 0.41
Hoxc6P10629 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Hoxc6P10629 Gm27494-201ENSMUST00000184735 189 ntBASIC17.63■□□□□ 0.41
Hoxc6P10629 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc6P10629 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms