Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ndufb1P0DN34 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC8.83□□□□□ -1
Ndufb1P0DN34 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC8.83□□□□□ -1
Ndufb1P0DN34 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC8.83□□□□□ -1
Ndufb1P0DN34 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC8.83□□□□□ -1
Ndufb1P0DN34 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ndufb1P0DN34 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC8.83□□□□□ -1
Ndufb1P0DN34 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufb1P0DN34 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Gm45003-201ENSMUST00000205875 2158 ntBASIC8.82□□□□□ -1
Ndufb1P0DN34 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC8.82□□□□□ -1
Ndufb1P0DN34 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC8.82□□□□□ -1
Ndufb1P0DN34 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ndufb1P0DN34 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Gm43697-201ENSMUST00000199637 2581 ntBASIC8.81□□□□□ -1
Ndufb1P0DN34 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Gm42473-201ENSMUST00000201056 2291 ntBASIC8.81□□□□□ -1
Ndufb1P0DN34 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC8.81□□□□□ -1
Ndufb1P0DN34 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC8.81□□□□□ -1
Ndufb1P0DN34 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ndufb1P0DN34 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms