Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.64■□□□□ 0.89
Hoxc9P09633 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Hoxc9P09633 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxc9P09633 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Hoxc9P09633 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.63■□□□□ 0.89
Hoxc9P09633 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hoxc9P09633 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxc9P09633 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Hoxc9P09633 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxc9P09633 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxc9P09633 Gm45747-201ENSMUST00000212203 999 ntBASIC20.62■□□□□ 0.89
Hoxc9P09633 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hoxc9P09633 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxc9P09633 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hoxc9P09633 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxc9P09633 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Hoxc9P09633 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxc9P09633 Haglr-201ENSMUST00000100000 2085 ntBASIC20.62■□□□□ 0.89
Hoxc9P09633 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.61■□□□□ 0.89
Hoxc9P09633 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.61■□□□□ 0.89
Hoxc9P09633 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.61■□□□□ 0.89
Hoxc9P09633 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hoxc9P09633 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxc9P09633 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.61■□□□□ 0.89
Hoxc9P09633 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Gm5177-201ENSMUST00000183092 997 ntBASIC20.6■□□□□ 0.89
Hoxc9P09633 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.6■□□□□ 0.89
Hoxc9P09633 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hoxc9P09633 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxc9P09633 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.59■□□□□ 0.89
Hoxc9P09633 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.59■□□□□ 0.89
Hoxc9P09633 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.59■□□□□ 0.89
Hoxc9P09633 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hoxc9P09633 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxc9P09633 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hoxc9P09633 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Gm14701-201ENSMUST00000117156 348 ntBASIC20.58■□□□□ 0.89
Hoxc9P09633 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.58■□□□□ 0.89
Hoxc9P09633 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.58■□□□□ 0.89
Hoxc9P09633 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.58■□□□□ 0.89
Hoxc9P09633 Gm10576-201ENSMUST00000191927 825 ntBASIC20.58■□□□□ 0.89
Hoxc9P09633 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxc9P09633 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxc9P09633 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Hoxc9P09633 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Hoxc9P09633 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxc9P09633 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms