Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.09■□□□□ 0.49
Polr2aP08775 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr2aP08775 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.09■□□□□ 0.49
Polr2aP08775 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Polr2aP08775 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Polr2aP08775 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr2aP08775 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr2aP08775 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.08■□□□□ 0.49
Polr2aP08775 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Polr2aP08775 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.08■□□□□ 0.49
Polr2aP08775 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Polr2aP08775 Gm25287-201ENSMUST00000103846 110 ntBASIC18.08■□□□□ 0.49
Polr2aP08775 Gm22918-201ENSMUST00000103855 110 ntBASIC18.08■□□□□ 0.49
Polr2aP08775 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.08■□□□□ 0.49
Polr2aP08775 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Polr2aP08775 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Polr2aP08775 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Polr2aP08775 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.08■□□□□ 0.48
Polr2aP08775 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Polr2aP08775 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
Polr2aP08775 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Polr2aP08775 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Polr2aP08775 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.08■□□□□ 0.48
Polr2aP08775 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Polr2aP08775 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Polr2aP08775 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.07■□□□□ 0.48
Polr2aP08775 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.07■□□□□ 0.48
Polr2aP08775 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Polr2aP08775 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Polr2aP08775 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.07■□□□□ 0.48
Polr2aP08775 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Polr2aP08775 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Gm10253-201ENSMUST00000194270 940 ntBASIC18.06■□□□□ 0.48
Polr2aP08775 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.06■□□□□ 0.48
Polr2aP08775 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Polr2aP08775 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.06■□□□□ 0.48
Polr2aP08775 Gm29541-201ENSMUST00000191351 678 ntBASIC18.06■□□□□ 0.48
Polr2aP08775 Gm5779-201ENSMUST00000218467 910 ntBASIC18.06■□□□□ 0.48
Polr2aP08775 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Polr2aP08775 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Polr2aP08775 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Polr2aP08775 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.05■□□□□ 0.48
Polr2aP08775 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.05■□□□□ 0.48
Polr2aP08775 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.05■□□□□ 0.48
Polr2aP08775 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.05■□□□□ 0.48
Polr2aP08775 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Polr2aP08775 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms