Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hoxa4P06798 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa4P06798 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxa4P06798 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hoxa4P06798 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxa4P06798 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxa4P06798 Gm8097-201ENSMUST00000117903 829 ntBASIC15.69■□□□□ 0.1
Hoxa4P06798 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.69■□□□□ 0.1
Hoxa4P06798 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxa4P06798 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.69■□□□□ 0.1
Hoxa4P06798 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa4P06798 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.68■□□□□ 0.1
Hoxa4P06798 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Mir8098-201ENSMUST00000184011 137 ntBASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm28659-201ENSMUST00000188013 759 ntBASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.68■□□□□ 0.1
Hoxa4P06798 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa4P06798 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxa4P06798 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Gm11780-201ENSMUST00000136880 516 ntBASIC15.67■□□□□ 0.1
Hoxa4P06798 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.67■□□□□ 0.1
Hoxa4P06798 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hoxa4P06798 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa4P06798 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm8344-201ENSMUST00000119813 856 ntBASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gm6376-201ENSMUST00000209407 580 ntBASIC15.66■□□□□ 0.1
Hoxa4P06798 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.66■□□□□ 0.1
Hoxa4P06798 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.66■□□□□ 0.1
Hoxa4P06798 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa4P06798 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms