Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
P06344 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P06344 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06344 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
P06344 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.21□□□□□ -0.13
P06344 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
P06344 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Mir8098-201ENSMUST00000184011 137 ntBASIC14.21□□□□□ -0.13
P06344 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.21□□□□□ -0.13
P06344 Gm28659-201ENSMUST00000188013 759 ntBASIC14.21□□□□□ -0.13
P06344 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
P06344 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06344 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
P06344 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
P06344 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P06344 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P06344 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
P06344 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.2□□□□□ -0.14
P06344 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.2□□□□□ -0.14
P06344 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Gm25745-201ENSMUST00000174945 133 ntBASIC14.2□□□□□ -0.14
P06344 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.2□□□□□ -0.14
P06344 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.2□□□□□ -0.14
P06344 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.2□□□□□ -0.14
P06344 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.2□□□□□ -0.14
P06344 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
P06344 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.2□□□□□ -0.14
P06344 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
P06344 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06344 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.2□□□□□ -0.14
P06344 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P06344 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Gm13884-201ENSMUST00000118103 829 ntBASIC14.19□□□□□ -0.14
P06344 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.19□□□□□ -0.14
P06344 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.19□□□□□ -0.14
P06344 Gm5864-201ENSMUST00000202263 970 ntBASIC14.19□□□□□ -0.14
P06344 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.19□□□□□ -0.14
P06344 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.19□□□□□ -0.14
P06344 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
P06344 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.19□□□□□ -0.14
P06344 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P06344 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
P06344 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06344 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
P06344 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P06344 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms