Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PrnpP04925 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PrnpP04925 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PrnpP04925 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PrnpP04925 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.51■□□□□ 0.23
PrnpP04925 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Gm9682-201ENSMUST00000197505 556 ntBASIC16.51■□□□□ 0.23
PrnpP04925 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PrnpP04925 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.51■□□□□ 0.23
PrnpP04925 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.51■□□□□ 0.23
PrnpP04925 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Chchd1-203ENSMUST00000224633 557 ntBASIC16.51■□□□□ 0.23
PrnpP04925 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PrnpP04925 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PrnpP04925 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.5■□□□□ 0.23
PrnpP04925 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.5■□□□□ 0.23
PrnpP04925 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.5■□□□□ 0.23
PrnpP04925 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.5■□□□□ 0.23
PrnpP04925 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.5■□□□□ 0.23
PrnpP04925 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.5■□□□□ 0.23
PrnpP04925 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PrnpP04925 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Rarb-207ENSMUST00000225921 2756 ntBASIC16.49■□□□□ 0.23
PrnpP04925 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
PrnpP04925 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.49■□□□□ 0.23
PrnpP04925 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.49■□□□□ 0.23
PrnpP04925 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.49■□□□□ 0.23
PrnpP04925 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.49■□□□□ 0.23
PrnpP04925 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PrnpP04925 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PrnpP04925 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.48■□□□□ 0.23
PrnpP04925 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PrnpP04925 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PrnpP04925 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.48■□□□□ 0.23
PrnpP04925 Gm11025-201ENSMUST00000140773 466 ntBASIC16.48■□□□□ 0.23
PrnpP04925 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PrnpP04925 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.48■□□□□ 0.23
PrnpP04925 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.48■□□□□ 0.23
PrnpP04925 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms