Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.16■□□□□ 0.02
Krt1P04104 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt1P04104 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt1P04104 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Krt1P04104 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt1P04104 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt1P04104 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt1P04104 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.15■□□□□ 0.02
Krt1P04104 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krt1P04104 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.15■□□□□ 0.02
Krt1P04104 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt1P04104 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Krt1P04104 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Krt1P04104 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Gm42642-201ENSMUST00000200683 355 ntBASIC15.14■□□□□ 0.01
Krt1P04104 Gm2559-201ENSMUST00000201323 363 ntBASIC15.14■□□□□ 0.01
Krt1P04104 AV356131-201ENSMUST00000206201 750 ntBASIC15.14■□□□□ 0.01
Krt1P04104 Gm18025-201ENSMUST00000221733 862 ntBASIC15.14■□□□□ 0.01
Krt1P04104 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Krt1P04104 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt1P04104 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Krt1P04104 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Krt1P04104 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt1P04104 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Krt1P04104 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Gm12382-201ENSMUST00000122005 922 ntBASIC15.13■□□□□ 0.01
Krt1P04104 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.13■□□□□ 0.01
Krt1P04104 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.13■□□□□ 0.01
Krt1P04104 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.13■□□□□ 0.01
Krt1P04104 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt1P04104 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Krt1P04104 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms