Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Gm12896-201ENSMUST00000118430 226 ntBASIC11.71□□□□□ -0.53
TcraP01849 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TcraP01849 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.71□□□□□ -0.53
TcraP01849 Gm6576-201ENSMUST00000169678 883 ntBASIC11.71□□□□□ -0.53
TcraP01849 Mir6349-201ENSMUST00000184059 97 ntBASIC11.71□□□□□ -0.53
TcraP01849 Gm10138-203ENSMUST00000206952 366 ntBASIC11.71□□□□□ -0.53
TcraP01849 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TcraP01849 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
TcraP01849 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TcraP01849 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TcraP01849 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TcraP01849 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.7□□□□□ -0.54
TcraP01849 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.7□□□□□ -0.54
TcraP01849 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.7□□□□□ -0.54
TcraP01849 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.7□□□□□ -0.54
TcraP01849 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TcraP01849 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TcraP01849 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.69□□□□□ -0.54
TcraP01849 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.69□□□□□ -0.54
TcraP01849 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TcraP01849 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
TcraP01849 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.69□□□□□ -0.54
TcraP01849 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TcraP01849 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.68□□□□□ -0.54
TcraP01849 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
TcraP01849 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.68□□□□□ -0.54
TcraP01849 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TcraP01849 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms