Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.34□□□□□ -0.11
Cops3O88543 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops3O88543 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops3O88543 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.34□□□□□ -0.11
Cops3O88543 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops3O88543 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cops3O88543 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops3O88543 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cops3O88543 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.33□□□□□ -0.12
Cops3O88543 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.33□□□□□ -0.12
Cops3O88543 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cops3O88543 Gm11336-201ENSMUST00000118168 334 ntBASIC14.33□□□□□ -0.12
Cops3O88543 Gm22240-201ENSMUST00000175225 82 ntBASIC14.33□□□□□ -0.12
Cops3O88543 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.33□□□□□ -0.12
Cops3O88543 Gm7213-201ENSMUST00000215977 950 ntBASIC14.33□□□□□ -0.12
Cops3O88543 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cops3O88543 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cops3O88543 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cops3O88543 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cops3O88543 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cops3O88543 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
Cops3O88543 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.32□□□□□ -0.12
Cops3O88543 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.32□□□□□ -0.12
Cops3O88543 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cops3O88543 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cops3O88543 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cops3O88543 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.31□□□□□ -0.12
Cops3O88543 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Cops3O88543 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cops3O88543 Gm16061-201ENSMUST00000122167 857 ntBASIC14.31□□□□□ -0.12
Cops3O88543 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cops3O88543 Gm30025-201ENSMUST00000218555 728 ntBASIC14.31□□□□□ -0.12
Cops3O88543 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.31□□□□□ -0.12
Cops3O88543 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cops3O88543 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms