Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cacna1hO88427 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cacna1hO88427 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.49■□□□□ 0.07
Cacna1hO88427 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Gm18246-201ENSMUST00000221023 728 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cacna1hO88427 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.48■□□□□ 0.07
Cacna1hO88427 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.48■□□□□ 0.07
Cacna1hO88427 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cacna1hO88427 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cacna1hO88427 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gm6266-201ENSMUST00000203844 806 ntBASIC15.47■□□□□ 0.07
Cacna1hO88427 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.47■□□□□ 0.07
Cacna1hO88427 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Gm8602-201ENSMUST00000184045 607 ntBASIC15.47■□□□□ 0.07
Cacna1hO88427 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.47■□□□□ 0.07
Cacna1hO88427 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cacna1hO88427 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cacna1hO88427 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.46■□□□□ 0.07
Cacna1hO88427 Gm2810-201ENSMUST00000118681 990 ntBASIC15.46■□□□□ 0.07
Cacna1hO88427 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.46■□□□□ 0.07
Cacna1hO88427 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.46■□□□□ 0.07
Cacna1hO88427 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cacna1hO88427 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cacna1hO88427 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cacna1hO88427 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.46■□□□□ 0.06
Cacna1hO88427 Gm25144-201ENSMUST00000179561 110 ntBASIC15.46■□□□□ 0.06
Cacna1hO88427 Gm25352-201ENSMUST00000179815 110 ntBASIC15.46■□□□□ 0.06
Cacna1hO88427 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cacna1hO88427 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Cacna1hO88427 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cacna1hO88427 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms