Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm27300-201ENSMUST00000184085 97 ntBASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gm27335-201ENSMUST00000184758 97 ntBASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.15■□□□□ 0.02
Tgfbr3O88393 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.15■□□□□ 0.02
Tgfbr3O88393 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.15■□□□□ 0.02
Tgfbr3O88393 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr3O88393 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Gm4899-201ENSMUST00000178708 719 ntBASIC15.14■□□□□ 0.01
Tgfbr3O88393 Gm10576-201ENSMUST00000191927 825 ntBASIC15.14■□□□□ 0.01
Tgfbr3O88393 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Chchd1-203ENSMUST00000224633 557 ntBASIC15.14■□□□□ 0.01
Tgfbr3O88393 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.14■□□□□ 0.01
Tgfbr3O88393 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr3O88393 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr3O88393 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Gm8344-201ENSMUST00000119813 856 ntBASIC15.12■□□□□ 0.01
Tgfbr3O88393 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.12■□□□□ 0.01
Tgfbr3O88393 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tgfbr3O88393 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.11■□□□□ 0.01
Tgfbr3O88393 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms