Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Gm13168-201ENSMUST00000121771 632 ntBASIC14.5□□□□□ -0.09
Pdlim3O70209 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Gm7370-201ENSMUST00000219471 767 ntBASIC14.5□□□□□ -0.09
Pdlim3O70209 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim3O70209 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.5□□□□□ -0.09
Pdlim3O70209 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim3O70209 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.5□□□□□ -0.09
Pdlim3O70209 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm11336-201ENSMUST00000118168 334 ntBASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.49□□□□□ -0.09
Pdlim3O70209 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.49□□□□□ -0.09
Pdlim3O70209 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.49□□□□□ -0.09
Pdlim3O70209 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim3O70209 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim3O70209 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.49□□□□□ -0.09
Pdlim3O70209 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms