Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6dO55057 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6dO55057 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6dO55057 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.65□□□□□ -0.39
Pde6dO55057 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.64□□□□□ -0.39
Pde6dO55057 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6dO55057 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pde6dO55057 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.64□□□□□ -0.39
Pde6dO55057 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.64□□□□□ -0.39
Pde6dO55057 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.64□□□□□ -0.39
Pde6dO55057 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Pde6dO55057 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6dO55057 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pde6dO55057 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pde6dO55057 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.63□□□□□ -0.39
Pde6dO55057 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6dO55057 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pde6dO55057 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pde6dO55057 Gm26524-201ENSMUST00000192339 390 ntBASIC12.63□□□□□ -0.39
Pde6dO55057 Gm18671-201ENSMUST00000214826 683 ntBASIC12.63□□□□□ -0.39
Pde6dO55057 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Rab3c-203ENSMUST00000224180 967 ntBASIC12.63□□□□□ -0.39
Pde6dO55057 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.63□□□□□ -0.39
Pde6dO55057 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pde6dO55057 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pde6dO55057 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pde6dO55057 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6dO55057 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.62□□□□□ -0.39
Pde6dO55057 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.62□□□□□ -0.39
Pde6dO55057 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pde6dO55057 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.62□□□□□ -0.39
Pde6dO55057 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Phf7-203ENSMUST00000226565 1971 ntBASIC12.62□□□□□ -0.39
Pde6dO55057 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pde6dO55057 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6dO55057 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms