Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarce1O54941 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarce1O54941 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarce1O54941 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarce1O54941 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarce1O54941 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarce1O54941 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Smarce1O54941 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19■□□□□ 0.63
Smarce1O54941 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smarce1O54941 Asic1-205ENSMUST00000228185 1818 ntBASIC19■□□□□ 0.63
Smarce1O54941 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smarce1O54941 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19■□□□□ 0.63
Smarce1O54941 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Gm6858-201ENSMUST00000208582 1468 ntBASIC19■□□□□ 0.63
Smarce1O54941 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19■□□□□ 0.63
Smarce1O54941 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19■□□□□ 0.63
Smarce1O54941 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarce1O54941 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
Smarce1O54941 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.99■□□□□ 0.63
Smarce1O54941 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Gm7889-201ENSMUST00000185591 958 ntBASIC18.99■□□□□ 0.63
Smarce1O54941 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.99■□□□□ 0.63
Smarce1O54941 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smarce1O54941 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smarce1O54941 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarce1O54941 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smarce1O54941 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarce1O54941 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.98■□□□□ 0.63
Smarce1O54941 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.98■□□□□ 0.63
Smarce1O54941 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smarce1O54941 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarce1O54941 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.98■□□□□ 0.63
Smarce1O54941 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.98■□□□□ 0.63
Smarce1O54941 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.98■□□□□ 0.63
Smarce1O54941 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Smarce1O54941 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarce1O54941 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarce1O54941 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarce1O54941 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarce1O54941 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms