Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Gm13186-201ENSMUST00000118031 316 ntBASIC12.65□□□□□ -0.38
Efnb3O35393 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Timm23-208ENSMUST00000226683 750 ntBASIC12.65□□□□□ -0.38
Efnb3O35393 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Efnb3O35393 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.65□□□□□ -0.38
Efnb3O35393 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.65□□□□□ -0.38
Efnb3O35393 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Efnb3O35393 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Efnb3O35393 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Efnb3O35393 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.64□□□□□ -0.39
Efnb3O35393 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Efnb3O35393 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Efnb3O35393 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Phf7-203ENSMUST00000226565 1971 ntBASIC12.63□□□□□ -0.39
Efnb3O35393 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
Efnb3O35393 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.63□□□□□ -0.39
Efnb3O35393 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.63□□□□□ -0.39
Efnb3O35393 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.63□□□□□ -0.39
Efnb3O35393 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.63□□□□□ -0.39
Efnb3O35393 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Efnb3O35393 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.63□□□□□ -0.39
Efnb3O35393 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
Efnb3O35393 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.63□□□□□ -0.39
Efnb3O35393 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Efnb3O35393 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms