Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Rprl3-201ENSMUST00000157400 290 ntBASIC14.78□□□□□ -0.04
Capn1O35350 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.78□□□□□ -0.04
Capn1O35350 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.78□□□□□ -0.04
Capn1O35350 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Capn1O35350 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Capn1O35350 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Capn1O35350 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Capn1O35350 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Capn1O35350 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Capn1O35350 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Capn1O35350 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Capn1O35350 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Capn1O35350 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.77□□□□□ -0.05
Capn1O35350 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.77□□□□□ -0.05
Capn1O35350 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.77□□□□□ -0.05
Capn1O35350 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.77□□□□□ -0.05
Capn1O35350 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.77□□□□□ -0.05
Capn1O35350 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Capn1O35350 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Capn1O35350 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Capn1O35350 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.77□□□□□ -0.05
Capn1O35350 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.76□□□□□ -0.05
Capn1O35350 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Capn1O35350 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Capn1O35350 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Capn1O35350 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Capn1O35350 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.76□□□□□ -0.05
Capn1O35350 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.76□□□□□ -0.05
Capn1O35350 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Gm12644-201ENSMUST00000119935 606 ntBASIC14.76□□□□□ -0.05
Capn1O35350 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Gm10052-201ENSMUST00000168019 960 ntBASIC14.76□□□□□ -0.05
Capn1O35350 Gm44430-201ENSMUST00000203376 995 ntBASIC14.76□□□□□ -0.05
Capn1O35350 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Gm7729-201ENSMUST00000050143 801 ntBASIC14.76□□□□□ -0.05
Capn1O35350 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Capn1O35350 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Capn1O35350 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Capn1O35350 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Capn1O35350 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Capn1O35350 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Capn1O35350 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Capn1O35350 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms