Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ercc2O08811 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ercc2O08811 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ercc2O08811 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.35■□□□□ 0.21
Ercc2O08811 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ercc2O08811 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ercc2O08811 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ercc2O08811 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ercc2O08811 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ercc2O08811 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ercc2O08811 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.34■□□□□ 0.21
Ercc2O08811 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ercc2O08811 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ercc2O08811 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc2O08811 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc2O08811 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc2O08811 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc2O08811 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.33■□□□□ 0.21
Ercc2O08811 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ercc2O08811 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.33■□□□□ 0.2
Ercc2O08811 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.33■□□□□ 0.2
Ercc2O08811 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc2O08811 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.33■□□□□ 0.2
Ercc2O08811 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc2O08811 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.33■□□□□ 0.2
Ercc2O08811 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.33■□□□□ 0.2
Ercc2O08811 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.33■□□□□ 0.2
Ercc2O08811 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.33■□□□□ 0.2
Ercc2O08811 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ercc2O08811 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ercc2O08811 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.2
Ercc2O08811 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ercc2O08811 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ercc2O08811 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ercc2O08811 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ercc2O08811 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.32■□□□□ 0.2
Ercc2O08811 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.32■□□□□ 0.2
Ercc2O08811 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.32■□□□□ 0.2
Ercc2O08811 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ercc2O08811 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ercc2O08811 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
Ercc2O08811 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.31■□□□□ 0.2
Ercc2O08811 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ercc2O08811 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms