Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc180J3QNE4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ccdc180J3QNE4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ccdc180J3QNE4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Gm7286-201ENSMUST00000182691 1007 ntBASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC28.82■■■□□ 2.2
Ccdc180J3QNE4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22065-201ENSMUST00000103753 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22066-201ENSMUST00000103761 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24932-201ENSMUST00000103763 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24115-201ENSMUST00000103799 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22190-201ENSMUST00000103827 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22191-201ENSMUST00000103831 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24721-201ENSMUST00000103849 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm28018-201ENSMUST00000103869 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm26399-201ENSMUST00000103937 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25349-201ENSMUST00000177728 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm23616-201ENSMUST00000177797 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25871-201ENSMUST00000177816 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24752-201ENSMUST00000178240 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24496-201ENSMUST00000178287 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25649-201ENSMUST00000178476 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25548-201ENSMUST00000178681 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm23147-201ENSMUST00000178841 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm26095-201ENSMUST00000179270 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22171-201ENSMUST00000179283 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm23936-201ENSMUST00000179354 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm22619-201ENSMUST00000179516 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25255-201ENSMUST00000179579 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24755-201ENSMUST00000179691 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm26506-201ENSMUST00000179692 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm25086-201ENSMUST00000179931 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm23243-201ENSMUST00000180047 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24659-201ENSMUST00000180212 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm24169-201ENSMUST00000180244 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm23689-201ENSMUST00000180354 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm27359-201ENSMUST00000184153 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm27785-201ENSMUST00000184268 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm27466-201ENSMUST00000184396 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm27703-201ENSMUST00000184836 110 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Gm43474-201ENSMUST00000196415 774 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ccdc180J3QNE4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms